plotDiagram {GCDkit} | R Documentation |
Plots the classification diagram, stored in the Figaro style sheet.
plotDiagram(diagram,select.samples=TRUE,new=TRUE,main=NULL,width=6.5,height=6.5,pointsize=10, bg="transparent",autoscale=TRUE,interactive=FALSE,...)
diagram |
a valid name of the classification diagram. See details. |
main |
optional alternative main title to the diagram. |
select.samples |
logical; should be invoked the dialogue for selecting samples? |
new |
logical; should be opened a new plotting window? |
width, height |
dimensions of the plotting window in inches. |
pointsize |
the default pointsize of plotted text, interpreted as big points (1/72 inch). |
bg |
plotting window background colour. |
autoscale |
logical; when some data fall outside the plot, display a dialogue to autoscale? |
interactive |
logical; for internal use by our French colleagues. |
... |
optional parameters to the plotting function |
The argument 'diagram
' may acquire one of following values:
'AFM', 'Miyashiro', 'PeceTaylor', 'Hastie', 'NaAlK', 'Shand', 'TAS', 'CoxVolc', 'TASMiddlemostVolc', 'Jensen', 'LarocheVolc', 'WinFloyd1', 'Pearce1996', 'WinFloyd2', 'QAPFVolc', 'OConnorVolc', 'CoxPlut', 'TASMiddlemostPlut', 'LarochePlut', 'DebonPQ', 'DebonBA', 'Villaseca', 'MiddlemostPlut', 'QAPFPlut', 'QANOR', 'Enrique', 'OConnorPlut', 'Batchelor', 'LaurentSource', 'Harris', 'Sylvester', 'LaYb', 'Meschede', 'Mullen', 'Norry', 'Shervais', 'PearceEtAl', 'Pearce1982', 'Hollocher1', 'Hollocher2', 'Ross','PearceNbThYb', 'PearceNbTiYb', 'Cabanis', 'OhtaArai'.
NB that this list can be shorter, reflecting the data available for plotting; it would also include any user-defined diagrams.
If some analyses plot outside the limits, a warning is shown, and the diagram can be rescaled.
none
Vojtěch Erban, erban@sopky.cz
classify
, figaro
,
AFM
, Miyashiro
,
PeceTaylor
, Hastie
,
NaAlK
, Shand
,
TAS
, Cox
,
TASMiddlemost
, Jensen
,
Laroche
, WinFloyd1
,
Pearce1996
, WinFloyd2
,
QAPF
, OConnor
,
DebonPQ
, DebonBA
,
Villaseca
, Middlemost
,
QANOR
, Enrique
,
Batchelor
, LaurentSource
,
Harris
, Sylvester
,
LaYb
, Meschede
,
Mullen
, Norry
,
Shervais
, PearceEtAl
,
Pearce1982
, Hollocher1
,
Hollocher2
, PearceNbThYb
,
PearceNbTiYb
, Ross
,
OhtaArai
, Cabanis
,
PearceDestructive1
, PearceDestructive2
,
PearceDestructive3
, Paulick
,
DebonKNaB
, DebonQB
,
DebonBMgNo
, DebonBQF
,
Grebennikov
.
data(atacazo) accessVar("atacazo") plotDiagram("TAS",FALSE) print(.claslist()) print(.tectlist()) print(.userlist())