plotDiagram {GCDkit}R Documentation

Plot Classification Diagram

Description

Plots the classification diagram, stored in the Figaro style sheet.

Usage

    plotDiagram(diagram,select.samples=TRUE,new=TRUE,main=NULL,width=6.5,height=6.5,pointsize=10,
        bg="transparent",autoscale=TRUE,interactive=FALSE,...)

Arguments

diagram

a valid name of the classification diagram. See details.

main

optional alternative main title to the diagram.

select.samples

logical; should be invoked the dialogue for selecting samples?

new

logical; should be opened a new plotting window?

width, height

dimensions of the plotting window in inches.

pointsize

the default pointsize of plotted text, interpreted as big points (1/72 inch).

bg

plotting window background colour.

autoscale

logical; when some data fall outside the plot, display a dialogue to autoscale?

interactive

logical; for internal use by our French colleagues.

...

optional parameters to the plotting function

Details

The argument 'diagram' may acquire one of following values:

    
'AFM', 'Miyashiro', 'PeceTaylor', 'Hastie', 'NaAlK', 

'Shand', 'TAS', 'CoxVolc', 'TASMiddlemostVolc', 

'Jensen', 'LarocheVolc', 'WinFloyd1', 

'Pearce1996', 'WinFloyd2', 'QAPFVolc', 'OConnorVolc',

'CoxPlut', 'TASMiddlemostPlut', 'LarochePlut', 'DebonPQ', 

'DebonBA', 'Villaseca', 'MiddlemostPlut', 'QAPFPlut', 

'QANOR', 'Enrique', 'OConnorPlut', 

'Batchelor', 'LaurentSource', 'Harris', 

'Sylvester', 'LaYb', 'Meschede', 'Mullen', 'Norry', 

'Shervais', 'PearceEtAl', 'Pearce1982', 'Hollocher1', 

'Hollocher2', 'Ross','PearceNbThYb', 'PearceNbTiYb', 

'Cabanis', 'OhtaArai'.

NB that this list can be shorter, reflecting the data available for plotting; it would also include any user-defined diagrams.

If some analyses plot outside the limits, a warning is shown, and the diagram can be rescaled.

Value

none

Author(s)

Vojtěch Erban, erban@sopky.cz

See Also

classify, figaro, AFM, Miyashiro, PeceTaylor, Hastie, NaAlK, Shand, TAS, Cox, TASMiddlemost, Jensen, Laroche, WinFloyd1, Pearce1996, WinFloyd2, QAPF, OConnor, DebonPQ, DebonBA, Villaseca, Middlemost, QANOR, Enrique, Batchelor, LaurentSource, Harris, Sylvester, LaYb, Meschede, Mullen, Norry, Shervais, PearceEtAl, Pearce1982, Hollocher1, Hollocher2, PearceNbThYb, PearceNbTiYb, Ross, OhtaArai, Cabanis, PearceDestructive1, PearceDestructive2, PearceDestructive3, Paulick, DebonKNaB, DebonQB, DebonBMgNo, DebonBQF, Grebennikov.

Examples

    data(atacazo)
    accessVar("atacazo")
    
    plotDiagram("TAS",FALSE)
    
    print(.claslist())
    print(.tectlist())
    print(.userlist())

[Package GCDkit version 6.1 Index]